Pseudomonas syringae pv. tomato DC3000, PSPTO_4305

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_4305
NCBI Old Locus Tag	PSPTO4305
Name	Synonym: PSPTO4305
Replicon	chromosome
Genomic location	4854807 - 4856267 (+ strand)

Cross-References

RefSeq	NP_794061.1
GI	28871442
Entrez	1185986
INSDC	AAO57756.1
NCBI Locus Tag	PSPTO_4305
NCBI Old Locus Tag	PSPTO4305
UniParc	UPI000000927E
UniProtKB Acc	Q87X83
UniProtKB ID	Q87X83_PSESM
UniRef100	UniRef100_Q87X83
UniRef50	UniRef50_Q9WWZ8
UniRef90	UniRef90_S3NN29

Product

Feature Type	CDS
Coding Frame	1
Product Name	outer membrane efflux protein
Synonyms
Evidence for Translation
Charge (pH 7)	-3.30
Kyte-Doolittle Hydrophobicity Value	-0.303
Molecular Weight (kDa)	53.3
Isoelectric Point (pI)	5.59

Subcellular localization

Individual Mappings	Localization Confidence PMID Outer Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 320 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000418 (534 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_4305 Search term: outer membrane efflux protein

Human Homologs

References