Pseudomonas syringae pv. tomato DC3000, PSPTO_4987

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_4987
NCBI Old Locus Tag	PSPTO4987
Name	Synonym: PSPTO4987
Replicon	chromosome
Genomic location	5660750 - 5661487 (- strand)

Cross-References

RefSeq	NP_794720.1
GI	28872101
Entrez	1186672
INSDC	AAO58415.1
NCBI Locus Tag	PSPTO_4987
NCBI Old Locus Tag	PSPTO4987
UniParc	UPI00000094F2
UniProtKB Acc	Q87VF0
UniProtKB ID	Q87VF0_PSESM
UniRef100	UniRef100_Q87VF0
UniRef50	UniRef50_S3MDW9
UniRef90	UniRef90_S3MDW9

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	2.00
Kyte-Doolittle Hydrophobicity Value	-0.380
Molecular Weight (kDa)	28.5
Isoelectric Point (pI)	7.43

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 9 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG016882 (92 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_4987

Human Homologs

References