Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_0124

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psp02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.1730.10 pa0076 domain IPR038225 T6S-associated protein TagF superfamily 1 186 7.0E-23
Pfam PF09867 TagF N-terminal domain, Type VI secretion system-associated IPR017748 T6S-associated protein TagF 3 115 8.8E-21
NCBIfam TIGR03373 JCVI: type VI secretion system-associated protein TagF IPR017748 T6S-associated protein TagF 3 135 1.7E-34

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.