Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_1193
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.30.450.20 | PAS domain | - | - | 195 | 286 | 3.5E-17 |
| FunFam | G3DSA:3.30.70.270:FF:000001 | Diguanylate cyclase domain protein | - | - | 331 | 499 | 1.8E-51 |
| SUPERFAMILY | SSF55073 | Nucleotide cyclase | IPR029787 | Nucleotide cyclase | 341 | 497 | 4.19E-46 |
| CDD | cd12915 | PDC2_DGC_like | - | - | 196 | 293 | 7.21243E-19 |
| NCBIfam | TIGR00254 | JCVI: diguanylate cyclase (GGDEF) domain | IPR000160 | GGDEF domain | 333 | 497 | 4.1E-50 |
| SMART | SM00267 | duf1_3 | IPR000160 | GGDEF domain | 325 | 498 | 5.5E-63 |
| PANTHER | PTHR45138 | REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM | - | - | 266 | 498 | 1.2E-64 |
| CDD | cd12914 | PDC1_DGC_like | - | - | 71 | 194 | 4.58917E-20 |
| CDD | cd01949 | GGDEF | IPR000160 | GGDEF domain | 338 | 495 | 3.92788E-62 |
| Gene3D | G3DSA:3.30.70.270 | - | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | 322 | 498 | 1.0E-55 |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | - | - | 42 | 192 | 1.4E-26 |
| Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 336 | 494 | 4.0E-46 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.