Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_1379

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_1379
Name
Replicon chromosome
Genomic location 1600790 - 1601884 (+ strand)

Cross-References

RefSeq YP_273636.1
GI 71734992
Entrez 3557316
INSDC AAZ34756.1
NCBI Locus Tag PSPPH_1379
UniParc UPI00005754D6
UniProtKB Acc Q48LT6
UniProtKB ID Q48LT6_PSE14
UniRef100 UniRef100_F3E9W8
UniRef50 UniRef50_A4G4Z1
UniRef90 UniRef90_Q87XN1

Product

Feature Type CDS
Coding Frame 1
Product Name
ATP-binding Mrp/Nbp35 family protein
Synonyms
Evidence for Translation
Charge (pH 7) -7.65
Kyte-Doolittle Hydrophobicity Value 0.152
Molecular Weight (kDa) 38.4
Isoelectric Point (pI) 5.02

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 645 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002161 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_1379

Human Homologs

Ensembl 110, assembly GRCh38.p14
NUBP iron-sulfur cluster assembly factor, mitochondrial [Source:HGNC Symbol;Acc:HGNC:20278]
E-value: 2.0e-66
Percent Identity: 45.7

References

No references are associated with this feature.