Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_1390

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_1390
Name
Replicon chromosome
Genomic location 1613399 - 1614445 (- strand)

Cross-References

RefSeq YP_273647.1
GI 71735727
Entrez 3558079
INSDC AAZ35491.1
NCBI Locus Tag PSPPH_1390
UniParc UPI00005754DF
UniProtKB Acc Q48LS5
UniProtKB ID Q48LS5_PSE14
UniRef100 UniRef100_Q48LS5
UniRef50 UniRef50_S3N165
UniRef90 UniRef90_S3N165

Product

Feature Type CDS
Coding Frame 1
Product Name
mRNA 3''''-end processing factor
Synonyms
Evidence for Translation
Charge (pH 7) -6.96
Kyte-Doolittle Hydrophobicity Value -0.327
Molecular Weight (kDa) 38256.6
Isoelectric Point (pI) 6.05

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 131 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015268 (180 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_1390

Human Homologs

References

No references are associated with this feature.