Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_1424 (hopAK1)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0030570 | pectate lyase activity |
Inferred from Sequence Model
Term mapped from: InterPro:PTHR31683
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 155 | 203 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 99 | 144 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 1 | 74 | - |
| Pfam | PF00544 | Pectate lyase | IPR002022 | Pectate lyase | 271 | 454 | 1.8E-32 |
| Gene3D | G3DSA:2.160.20.10 | - | IPR012334 | Pectin lyase fold | 221 | 524 | 5.4E-46 |
| SUPERFAMILY | SSF51126 | Pectin lyase-like | IPR011050 | Pectin lyase fold/virulence factor | 222 | 521 | 8.96E-52 |
| SMART | SM00656 | amb_all | IPR002022 | Pectate lyase | 237 | 460 | 7.4E-31 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 99 | 224 | - |
| PANTHER | PTHR31683 | PECTATE LYASE 18-RELATED | IPR045032 | Pectin lyase family | 221 | 464 | 1.0E-15 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.