Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_1427 (fadD2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psp01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psp01212 Fatty acid metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psp02024 Quorum sensing 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psp00061 Fatty acid biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psp00071 Fatty acid degradation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.50.980 - - - 47 373 7.2E-115
FunFam G3DSA:3.30.300.30:FF:000006 Long-chain-fatty-acid--CoA ligase FadD - - 456 558 7.3E-48
Gene3D G3DSA:3.30.300.30 - IPR045851 AMP-binding enzyme, C-terminal domain superfamily 456 558 1.0E-28
Gene3D G3DSA:3.40.50.980 - - - 52 228 7.2E-115
Pfam PF13193 AMP-binding enzyme C-terminal domain IPR025110 AMP-binding enzyme, C-terminal domain 470 545 1.8E-17
FunFam G3DSA:3.40.50.12780:FF:000003 Long-chain-fatty-acid--CoA ligase FadD - - 11 456 0.0
SUPERFAMILY SSF56801 Acetyl-CoA synthetase-like - - 19 557 0.0
Gene3D G3DSA:2.30.38.10 Luciferase; Domain 3 - - 374 447 7.2E-115
CDD cd05936 FC-FACS_FadD_like - - 26 552 0.0
Pfam PF00501 AMP-binding enzyme IPR000873 AMP-dependent synthetase/ligase domain 33 461 2.4E-107
PANTHER PTHR43767 LONG-CHAIN-FATTY-ACID--COA LIGASE - - 24 551 8.5E-130

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.