Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_1854

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00083
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00083
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00083
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.20.1250.20 MFS general substrate transporter like domains IPR036259 MFS transporter superfamily 10 232 1.6E-32
Gene3D G3DSA:1.20.1250.20 MFS general substrate transporter like domains IPR036259 MFS transporter superfamily 233 420 1.1E-16
Pfam PF07690 Major Facilitator Superfamily IPR011701 Major facilitator superfamily 241 416 2.0E-9
PANTHER PTHR43528 ALPHA-KETOGLUTARATE PERMEASE - - 5 421 0.0
FunFam G3DSA:1.20.1250.20:FF:000001 Dicarboxylate MFS transporter - - 7 224 2.8E-81
Pfam PF00083 Sugar (and other) transporter IPR005828 Major facilitator, sugar transporter-like 13 211 9.9E-24
SUPERFAMILY SSF103473 MFS general substrate transporter IPR036259 MFS transporter superfamily 9 417 6.15E-63

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.