Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_2099 (pcaB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF48557
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0019619 3,4-dihydroxybenzoate catabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02426
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psp01220 Degradation of aromatic compounds 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psp01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psp00362 Benzoate degradation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psp01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00145 Argininosuccinate lyase family signature - - 278 294 2.7E-10
Gene3D G3DSA:1.10.40.30 - - - 365 452 2.9E-31
SMART SM00998 ADSL_C_2 IPR019468 Adenylosuccinate lyase C-terminal 366 445 3.3E-30
PRINTS PR00145 Argininosuccinate lyase family signature - - 102 124 2.7E-10
Pfam PF00206 Lyase IPR022761 Fumarate lyase, N-terminal 15 303 1.1E-66
Gene3D G3DSA:1.20.200.10 Fumarase/aspartase (Central domain) - - 108 363 2.9E-73
PRINTS PR00149 Fumarate lyase superfamily signature IPR000362 Fumarate lyase family 103 121 2.4E-24
FunFam G3DSA:1.10.275.10:FF:000015 3-carboxy-cis,cis-muconate cycloisomerase - - 4 107 6.2E-46
Pfam PF10397 Adenylosuccinate lyase C-terminus IPR019468 Adenylosuccinate lyase C-terminal 367 444 1.7E-20
CDD cd01597 pCLME - - 8 447 0.0
PRINTS PR00145 Argininosuccinate lyase family signature - - 143 163 2.7E-10
PRINTS PR00149 Fumarate lyase superfamily signature IPR000362 Fumarate lyase family 148 166 2.4E-24
FunFam G3DSA:1.10.40.30:FF:000007 Adenylosuccinate lyase - - 366 447 5.2E-26
Gene3D G3DSA:1.10.275.10 - IPR024083 Fumarase/histidase, N-terminal 4 107 3.3E-38
PANTHER PTHR43172 ADENYLOSUCCINATE LYASE - - 5 451 9.2E-119
PRINTS PR00145 Argininosuccinate lyase family signature - - 233 257 2.7E-10
SUPERFAMILY SSF48557 L-aspartase-like IPR008948 L-Aspartase-like 8 449 3.46E-121
PRINTS PR00149 Fumarate lyase superfamily signature IPR000362 Fumarate lyase family 233 260 2.4E-24
FunFam G3DSA:1.20.200.10:FF:000014 3-carboxy-cis,cis-muconate cycloisomerase - - 1 363 0.0
PRINTS PR00149 Fumarate lyase superfamily signature IPR000362 Fumarate lyase family 278 294 2.4E-24
NCBIfam TIGR02426 JCVI: 3-carboxy-cis,cis-muconate cycloisomerase IPR012789 3-carboxy-cis,cis-muconate cycloisomerase-like 8 351 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.