Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_2270
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0005515 | protein binding |
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.25.40.10
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF48452 | TPR-like | IPR011990 | Tetratricopeptide-like helical domain superfamily | 177 | 376 | 2.56E-21 |
| SMART | SM00028 | tpr_5 | IPR019734 | Tetratricopeptide repeat | 209 | 242 | 0.14 |
| Coils | Coil | Coil | - | - | 192 | 219 | - |
| SMART | SM00028 | tpr_5 | IPR019734 | Tetratricopeptide repeat | 311 | 344 | 98.0 |
| SUPERFAMILY | SSF48371 | ARM repeat | IPR016024 | Armadillo-type fold | 83 | 204 | 1.86E-6 |
| PANTHER | PTHR44227 | - | - | - | 198 | 382 | 1.2E-11 |
| Pfam | PF13646 | HEAT repeats | - | - | 92 | 176 | 5.5E-7 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | IPR011990 | Tetratricopeptide-like helical domain superfamily | 147 | 385 | 2.5E-27 |
| Pfam | PF13428 | Tetratricopeptide repeat | - | - | 212 | 250 | 6.3E-6 |
| SMART | SM00028 | tpr_5 | IPR019734 | Tetratricopeptide repeat | 277 | 310 | 320.0 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.