Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_2297

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0046872 metal ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR33677
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR33677
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR33677
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.20.58.1000 - IPR038390 Metal-sensitive repressor, helix protomer superfamily 2 97 7.0E-26
Pfam PF02583 Metal-sensitive transcriptional repressor IPR003735 Metal-sensitive transcriptional repressor 15 79 1.7E-22
CDD cd10154 NreA-like_DUF156 - - 12 97 2.10728E-49
PANTHER PTHR33677 TRANSCRIPTIONAL REPRESSOR FRMR-RELATED IPR003735 Metal-sensitive transcriptional repressor 2 96 1.6E-18

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.