Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_2298
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0035444 | nickel cation transmembrane transport |
Inferred from Sequence Model
Term mapped from: InterPro:PF03824
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Cellular Component | GO:0005886 | plasma membrane |
Inferred from Sequence Model
Term mapped from: InterPro:PF03824
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0015099 | nickel cation transmembrane transporter activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF03824
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF03824 | High-affinity nickel-transport protein | IPR011541 | Nickel/cobalt transporter, high-affinity | 16 | 79 | 1.3E-7 |
| PANTHER | PTHR40659 | NICKEL/COBALT EFFLUX SYSTEM RCNA | - | - | 9 | 79 | 2.3E-36 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.