Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_2308

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01609
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004803 transposase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01609
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006313 transposition, DNA-mediated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01609
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF01609 Transposase DDE domain IPR002559 Transposase IS4-like domain 189 355 9.7E-14
Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) IPR025161 Putative transposase IS4/IS5 family 98 171 1.3E-24
PANTHER PTHR30007 PHP DOMAIN PROTEIN - - 90 366 9.5E-70
MobiDBLite mobidb-lite consensus disorder prediction - - 180 213 -
MobiDBLite mobidb-lite consensus disorder prediction - - 190 205 -
NCBIfam NF033580 NCBIFAM: IS5 family transposase - - 95 361 9.3E-59

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.