Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_2922
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | psp02024 | Quorum sensing | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | - | - | 24 | 203 | 2.35E-51 |
| PANTHER | PTHR30290 | PERIPLASMIC BINDING COMPONENT OF ABC TRANSPORTER | IPR039424 | Solute-binding protein family 5 | 3 | 200 | 1.6E-36 |
| Pfam | PF00496 | Bacterial extracellular solute-binding proteins, family 5 Middle | IPR000914 | Solute-binding protein family 5 domain | 71 | 203 | 1.7E-34 |
| Gene3D | G3DSA:3.40.190.10 | - | - | - | 17 | 205 | 5.9E-50 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.