Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_4718 (bioC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_4718
Name
bioC
Replicon chromosome
Genomic location 5355251 - 5356060 (- strand)

Cross-References

RefSeq YP_276819.1
GI 71735745
Entrez 3558098
INSDC AAZ35509.1
NCBI Locus Tag PSPPH_4718
UniParc UPI0000576081
UniProtKB Acc Q48CS4
UniProtKB ID Q48CS4_PSE14
UniRef100 UniRef100_Q48CS4
UniRef50 UniRef50_A6UYW3
UniRef90 UniRef90_D7I605

Product

Feature Type CDS
Coding Frame 1
Product Name
biotin biosynthesis protein BioC
Synonyms
Evidence for Translation
Charge (pH 7) -0.99
Kyte-Doolittle Hydrophobicity Value -0.116
Molecular Weight (kDa) 29348.0
Isoelectric Point (pI) 6.79

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 403 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000490 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_4718
Search term: bioC

Human Homologs

References

No references are associated with this feature.