Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_4729
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | psp02024 | Quorum sensing | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PANTHER | PTHR30006 | THIAMINE-BINDING PERIPLASMIC PROTEIN-RELATED | - | - | 10 | 296 | 3.3E-43 |
| Gene3D | G3DSA:3.40.190.10 | - | - | - | 126 | 301 | 1.1E-57 |
| SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | - | - | 23 | 324 | 2.04E-61 |
| Pfam | PF13343 | Bacterial extracellular solute-binding protein | - | - | 74 | 314 | 6.0E-50 |
| Gene3D | G3DSA:3.40.190.10 | - | - | - | 42 | 300 | 1.1E-57 |
| CDD | cd13549 | PBP2_Fbp_like_3 | - | - | 25 | 287 | 0.0 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.