Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_4730

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0003677	DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00356	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00356	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SUPERFAMILY	SSF53822	Periplasmic binding protein-like I	IPR028082	Periplasmic binding protein-like I	110	363	1.5E-66
Gene3D	G3DSA:1.10.260.40	-	IPR010982	Lambda repressor-like, DNA-binding domain superfamily	46	108	4.0E-16
Gene3D	G3DSA:3.40.50.2300	-	-	-	212	340	9.6E-69
Pfam	PF00356	Bacterial regulatory proteins, lacI family	IPR000843	LacI-type HTH domain	55	99	1.1E-13
SUPERFAMILY	SSF47413	lambda repressor-like DNA-binding domains	IPR010982	Lambda repressor-like, DNA-binding domain superfamily	52	110	8.44E-14
CDD	cd06282	PBP1_LacI-like	-	-	112	377	0.0
SMART	SM00354	laci3	IPR000843	LacI-type HTH domain	52	122	5.1E-24
Pfam	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family	IPR001761	Periplasmic binding protein/LacI sugar binding domain	112	326	7.0E-28
PANTHER	PTHR30146	LACI-RELATED TRANSCRIPTIONAL REPRESSOR	-	-	52	382	9.5E-86
Gene3D	G3DSA:3.40.50.2300	-	-	-	113	359	9.6E-69
CDD	cd01392	HTH_LacI	IPR000843	LacI-type HTH domain	56	106	3.55182E-16

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.