Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_4734 (glcB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004474 malate synthase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01345
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006097 glyoxylate cycle
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01345
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF51645
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
MetaCyc crotonyl-CoA/ethylmalonyl-CoA/hydroxybutyryl-CoA cycle (engineered) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG psp01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc D-xylose degradation IV InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG psp01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc chitin degradation to ethanol InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG psp01200 Carbon metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psp01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG (InterPro) 00630 Glyoxylate and dicarboxylate metabolism InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG (InterPro) 00620 Pyruvate metabolism InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG psp00630 Glyoxylate and dicarboxylate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psp00620 Pyruvate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc L-arabinose degradation IV InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.20.20.360 7 580 0.0
SUPERFAMILY SSF51645 IPR011076 Malate synthase-like superfamily 2 722 0.0
CDD cd00728 malate_synt_G IPR006253 Malate synthase G 10 720 0.0
Hamap MF_00641 Malate synthase G [glcB]. IPR006253 Malate synthase G 1 725 420.386
Gene3D G3DSA:1.20.1220.12 584 725 9.3E-76
TIGRFAM TIGR01345 malate_syn_G: malate synthase G IPR006253 Malate synthase G 4 722 0.0
Pfam PF01274 Malate synthase IPR001465 Malate synthase 18 696 0.0
Gene3D G3DSA:2.170.170.11 IPR023310 Malate synthase G, beta sub-domain 135 264 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.