Pseudomonas fulva 12-X, Psefu_0084

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00506
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009231 riboflavin biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00506
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfv01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfv00740 Riboflavin metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfv01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR21327 GTP CYCLOHYDROLASE II-RELATED - - 1 366 3.6E-91
Gene3D G3DSA:3.90.870.10 DHBP synthase - - 1 205 2.7E-86
Pfam PF00925 GTP cyclohydrolase II IPR032677 GTP cyclohydrolase II 211 366 1.0E-28
Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB 1 203 37.074734
NCBIfam TIGR00506 JCVI: 3,4-dihydroxy-2-butanone-4-phosphate synthase IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB 3 199 4.9E-70
SUPERFAMILY SSF142695 RibA-like IPR036144 GTP cyclohydrolase II superfamily 204 367 1.19E-40
Gene3D G3DSA:3.40.50.10990 GTP cyclohydrolase II IPR036144 GTP cyclohydrolase II superfamily 206 368 2.4E-26
SUPERFAMILY SSF55821 YrdC/RibB IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily 2 202 2.75E-84
FunFam G3DSA:3.90.870.10:FF:000001 Riboflavin biosynthesis protein RibBA - - 1 205 7.3E-93
Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB 8 198 3.1E-79
PIRSF PIRSF001259 RibA - - 1 368 4.7E-113

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.