Pseudomonas fulva 12-X, Psefu_0211

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0050660	flavin adenine dinucleotide binding	ISM Inferred from Sequence Model Term mapped from: InterPro:G3DSA:1.10.540.10	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	ISM Inferred from Sequence Model Term mapped from: InterPro:PF02770	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pfv01130	Biosynthesis of antibiotics	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pfv01120	Microbial metabolism in diverse environments	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pfv00071	Fatty acid degradation	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pfv00362	Benzoate degradation	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pfv00380	Tryptophan metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pfv00310	Lysine degradation	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pfv01100	Metabolic pathways	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SUPERFAMILY	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like	IPR036250	Acyl-CoA dehydrogenase-like, C-terminal	243	390	1.93E-42
Pfam	PF00441	Acyl-CoA dehydrogenase, C-terminal domain	IPR009075	Acyl-CoA dehydrogenase/oxidase, C-terminal	239	385	5.3E-28
Pfam	PF02771	Acyl-CoA dehydrogenase, N-terminal domain	IPR013786	Acyl-CoA dehydrogenase/oxidase, N-terminal	20	132	1.5E-34
PIRSF	PIRSF016578	PIGM	-	-	149	391	2.6E-9
PANTHER	PTHR42807	GLUTARYL-COA DEHYDROGENASE, MITOCHONDRIAL	-	-	4	392	0.0
FunFam	G3DSA:1.10.540.10:FF:000003	glutaryl-CoA dehydrogenase, mitochondrial	-	-	1	133	6.9E-58
PIRSF	PIRSF016578	PIGM	-	-	15	93	0.052
SUPERFAMILY	SSF56645	Acyl-CoA dehydrogenase NM domain-like	IPR009100	Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily	7	238	8.9E-74
Gene3D	G3DSA:1.10.540.10	-	IPR037069	Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily	2	133	1.3E-41
FunFam	G3DSA:1.20.140.10:FF:000006	Glutaryl-CoA dehydrogenase, mitochondrial	-	-	241	393	3.1E-83
Pfam	PF02770	Acyl-CoA dehydrogenase, middle domain	IPR006091	Acyl-CoA oxidase/dehydrogenase, middle domain	136	227	1.2E-19
Gene3D	G3DSA:1.20.140.10	-	-	-	240	393	6.5E-47
Gene3D	G3DSA:2.40.110.10	-	IPR046373	Acyl-CoA oxidase/dehydrogenase, middle domain superfamily	135	237	1.5E-29
CDD	cd01151	GCD	-	-	7	392	0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.