Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 31 | 41 | 4.3E-7 |
Gene3D | G3DSA:1.10.10.10 | - | IPR036388 | Winged helix-like DNA-binding domain superfamily | 4 | 94 | 3.8E-22 |
Pfam | PF03466 | LysR substrate binding domain | IPR005119 | LysR, substrate-binding | 90 | 289 | 2.0E-23 |
FunFam | G3DSA:1.10.10.10:FF:000001 | LysR family transcriptional regulator | - | - | 1 | 86 | 2.5E-21 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 41 | 52 | 4.3E-7 |
SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | - | - | 90 | 290 | 2.17E-24 |
CDD | cd05466 | PBP2_LTTR_substrate | - | - | 112 | 288 | 2.38847E-15 |
PANTHER | PTHR30126 | HTH-TYPE TRANSCRIPTIONAL REGULATOR | - | - | 1 | 288 | 5.0E-50 |
Gene3D | G3DSA:3.40.190.290 | - | - | - | 95 | 285 | 1.7E-16 |
Pfam | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family | IPR000847 | Transcription regulator HTH, LysR | 7 | 63 | 8.1E-19 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 20 | 31 | 4.3E-7 |
SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | IPR036390 | Winged helix DNA-binding domain superfamily | 5 | 89 | 1.06E-19 |
Coils | Coil | Coil | - | - | 105 | 125 | - |