Pseudomonas fulva 12-X, Psefu_1381
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SMART | SM00267 | duf1_3 | IPR000160 | GGDEF domain | 209 | 380 | 9.6E-53 |
| Pfam | PF00563 | EAL domain | IPR001633 | EAL domain | 396 | 627 | 2.4E-69 |
| Gene3D | G3DSA:3.30.70.270 | - | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | 218 | 386 | 1.6E-47 |
| NCBIfam | TIGR00254 | JCVI: diguanylate cyclase (GGDEF) domain | IPR000160 | GGDEF domain | 218 | 376 | 3.7E-32 |
| SUPERFAMILY | SSF141868 | EAL domain-like | IPR035919 | EAL domain superfamily | 395 | 639 | 9.02E-82 |
| CDD | cd01948 | EAL | IPR001633 | EAL domain | 396 | 632 | 4.61307E-99 |
| CDD | cd01949 | GGDEF | IPR000160 | GGDEF domain | 220 | 378 | 1.94406E-56 |
| Gene3D | G3DSA:3.20.20.450 | EAL domain | IPR035919 | EAL domain superfamily | 393 | 647 | 7.9E-89 |
| SMART | SM00052 | duf2_2 | IPR001633 | EAL domain | 386 | 632 | 1.4E-85 |
| PANTHER | PTHR33121 | CYCLIC DI-GMP PHOSPHODIESTERASE PDEF | - | - | 198 | 638 | 0.0 |
| SUPERFAMILY | SSF55073 | Nucleotide cyclase | IPR029787 | Nucleotide cyclase | 224 | 381 | 2.43E-43 |
| Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 219 | 373 | 1.0E-40 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.