Pseudomonas fulva 12-X, Psefu_1683
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0016779 | nucleotidyltransferase activity |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01479
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0000271 | polysaccharide biosynthetic process |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01479
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0009058 | biosynthetic process |
Inferred from Sequence Model
Term mapped from: InterPro:PF00483
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0005976 | polysaccharide metabolic process |
Inferred from Sequence Model
Term mapped from: InterPro:PF01050
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | pfv01110 | Biosynthesis of secondary metabolites | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pfv01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pfv00051 | Fructose and mannose metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pfv00520 | Amino sugar and nucleotide sugar metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF00483 | Nucleotidyl transferase | IPR005835 | Nucleotidyl transferase domain | 3 | 285 | 1.3E-67 |
| FunFam | G3DSA:2.60.120.10:FF:000032 | Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | - | - | 345 | 462 | 9.2E-58 |
| PANTHER | PTHR46390 | MANNOSE-1-PHOSPHATE GUANYLYLTRANSFERASE | - | - | 2 | 461 | 0.0 |
| CDD | cd02213 | cupin_PMI_typeII_C | - | - | 334 | 461 | 7.12275E-72 |
| NCBIfam | TIGR01479 | JCVI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | IPR006375 | Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | 1 | 467 | 0.0 |
| CDD | cd02509 | GDP-M1P_Guanylyltransferase | - | - | 1 | 276 | 0.0 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | IPR014710 | RmlC-like jelly roll fold | 345 | 452 | 6.0E-19 |
| Coils | Coil | Coil | - | - | 328 | 348 | - |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | IPR011051 | RmlC-like cupin domain superfamily | 183 | 474 | 2.19E-93 |
| FunFam | G3DSA:3.90.550.10:FF:000046 | Mannose-1-phosphate guanylyltransferase (GDP) | - | - | 1 | 348 | 0.0 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | IPR029044 | Nucleotide-diphospho-sugar transferases | 1 | 279 | 8.45E-72 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | IPR029044 | Nucleotide-diphospho-sugar transferases | 1 | 344 | 1.7E-122 |
| Pfam | PF01050 | Mannose-6-phosphate isomerase | IPR001538 | Mannose-6-phosphate isomerase, type II, C-terminal | 313 | 463 | 4.0E-75 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.