Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0004834 | tryptophan synthase activity |
Inferred from Sequence Model
Term mapped from: InterPro:MF_00133
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006568 | tryptophan metabolic process |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00263
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0000162 | tryptophan biosynthetic process |
Inferred from Sequence Model
Term mapped from: InterPro:MF_00133
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
KEGG | pba00400 | Phenylalanine, tyrosine and tryptophan biosynthesis | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | pba01130 | Biosynthesis of antibiotics | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | pba01110 | Biosynthesis of secondary metabolites | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | pba01230 | Biosynthesis of amino acids | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | pba01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | pba00260 | Glycine, serine and threonine metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
NCBIfam | TIGR00263 | JCVI: tryptophan synthase subunit beta | IPR006654 | Tryptophan synthase, beta chain | 18 | 401 | 0.0 |
FunFam | G3DSA:3.40.50.1100:FF:000001 | Tryptophan synthase beta chain | - | - | 79 | 216 | 2.0E-63 |
Pfam | PF00291 | Pyridoxal-phosphate dependent enzyme | IPR001926 | Tryptophan synthase beta chain-like, PALP domain | 64 | 389 | 2.0E-46 |
FunFam | G3DSA:3.40.50.1100:FF:000004 | Tryptophan synthase beta chain | - | - | 217 | 395 | 7.4E-85 |
SUPERFAMILY | SSF53686 | Tryptophan synthase beta subunit-like PLP-dependent enzymes | IPR036052 | Tryptophan synthase beta chain-like, PALP domain superfamily | 14 | 400 | 0.0 |
Hamap | MF_00133 | Tryptophan synthase beta chain [trpB]. | IPR023026 | Tryptophan synthase beta chain/beta chain-like | 13 | 402 | 52.416553 |
PIRSF | PIRSF001413 | Trp_syn_beta | IPR023026 | Tryptophan synthase beta chain/beta chain-like | 11 | 408 | 0.0 |
Gene3D | G3DSA:3.40.50.1100 | - | IPR036052 | Tryptophan synthase beta chain-like, PALP domain superfamily | 65 | 396 | 0.0 |
Gene3D | G3DSA:3.40.50.1100 | - | IPR036052 | Tryptophan synthase beta chain-like, PALP domain superfamily | 20 | 217 | 0.0 |
CDD | cd06446 | Trp-synth_B | IPR006654 | Tryptophan synthase, beta chain | 38 | 398 | 0.0 |
PANTHER | PTHR48077 | TRYPTOPHAN SYNTHASE-RELATED | IPR023026 | Tryptophan synthase beta chain/beta chain-like | 19 | 404 | 0.0 |