Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a366

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004645 1,4-alpha-oligoglucan phosphorylase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02093
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0005975 carbohydrate metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000460
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008184 glycogen phosphorylase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000460
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0030170 pyridoxal phosphate binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02093
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pba01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pba00500 Starch and sucrose metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pba01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:3.40.50.2000:FF:000003 Alpha-1,4 glucan phosphorylase - - 476 799 5.4E-128
NCBIfam TIGR02093 JCVI: glycogen/starch/alpha-glucan family phosphorylase IPR011833 Glycogen/starch/alpha-glucan phosphorylase 13 813 0.0
CDD cd04300 GT35_Glycogen_Phosphorylase - - 16 813 0.0
Gene3D G3DSA:3.40.50.2000 Glycogen Phosphorylase B; - - 471 799 0.0
PIRSF PIRSF000460 Glucan_phosphorylase_GlgP IPR000811 Glycosyl transferase, family 35 1 816 0.0
Gene3D G3DSA:3.40.50.2000 Glycogen Phosphorylase B; - - 22 813 0.0
PANTHER PTHR11468 GLYCOGEN PHOSPHORYLASE IPR000811 Glycosyl transferase, family 35 10 813 0.0
FunFam G3DSA:3.40.50.2000:FF:000153 Alpha-1,4 glucan phosphorylase - - 5 475 0.0
Pfam PF00343 Carbohydrate phosphorylase IPR000811 Glycosyl transferase, family 35 100 813 0.0
SUPERFAMILY SSF53756 UDP-Glycosyltransferase/glycogen phosphorylase - - 9 813 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.