Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a657

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0046872 metal ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF55008
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0019829 ATPase-coupled cation transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01525
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005507 copper ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00003
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005215 transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01494
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000166 nucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.40.1110.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01494
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01494
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01525
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006812 cation transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01525
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.70.100 - - - 4 69 1.2E-16
Pfam PF00702 haloacid dehalogenase-like hydrolase - - 479 697 9.8E-42
NCBIfam TIGR01511 JCVI: copper-translocating P-type ATPase - - 200 786 0.0
SFLD SFLDF00027 p-type atpase IPR044492 P-type ATPase, haloacid dehalogenase domain 465 735 0.0
SUPERFAMILY SSF81653 Calcium ATPase, transduction domain A IPR008250 P-type ATPase, A domain superfamily 286 383 4.97E-23
PRINTS PR00119 P-type cation-transporting ATPase superfamily signature - - 683 702 6.7E-21
SUPERFAMILY SSF55008 HMA, heavy metal-associated domain IPR036163 Heavy metal-associated domain superfamily 70 141 2.75E-22
Pfam PF00403 Heavy-metal-associated domain IPR006121 Heavy metal-associated domain, HMA 75 134 6.9E-14
Gene3D G3DSA:3.30.70.100 - - - 70 138 5.2E-23
FunFam G3DSA:2.70.150.10:FF:000002 Copper-transporting ATPase 1, putative - - 271 387 1.2E-35
PRINTS PR00119 P-type cation-transporting ATPase superfamily signature - - 483 497 6.7E-21
SUPERFAMILY SSF81665 Calcium ATPase, transmembrane domain M IPR023298 P-type ATPase, transmembrane domain superfamily 254 757 8.11E-16
PANTHER PTHR43520 ATP7, ISOFORM B - - 3 789 0.0
NCBIfam TIGR00003 JCVI: copper ion binding protein IPR006122 Heavy metal-associated domain, copper ion-binding 74 135 4.4E-12
Pfam PF00122 E1-E2 ATPase - - 284 463 2.9E-53
CDD cd00371 HMA IPR006121 Heavy metal-associated domain, HMA 74 136 6.71865E-22
PRINTS PR00943 Copper-transporting ATPase signature - - 253 272 4.0E-13
CDD cd02094 P-type_ATPase_Cu-like - - 158 787 0.0
PRINTS PR00119 P-type cation-transporting ATPase superfamily signature - - 706 718 6.7E-21
NCBIfam TIGR00003 JCVI: copper ion binding protein IPR006122 Heavy metal-associated domain, copper ion-binding 8 68 1.8E-7
NCBIfam TIGR01525 JCVI: heavy metal translocating P-type ATPase IPR027256 P-type ATPase, subfamily IB 218 785 0.0
CDD cd00371 HMA IPR006121 Heavy metal-associated domain, HMA 8 68 3.24208E-15
PRINTS PR00943 Copper-transporting ATPase signature - - 203 222 4.0E-13
Gene3D G3DSA:3.40.1110.10 - IPR023299 P-type ATPase, cytoplasmic domain N 494 615 9.1E-27
SUPERFAMILY SSF56784 HAD-like IPR036412 HAD-like superfamily 481 783 1.79E-57
PRINTS PR00943 Copper-transporting ATPase signature - - 466 481 4.0E-13
PRINTS PR00943 Copper-transporting ATPase signature - - 87 101 4.0E-13
PRINTS PR00119 P-type cation-transporting ATPase superfamily signature - - 333 347 6.7E-21
FunFam G3DSA:3.30.70.100:FF:000005 Copper-exporting P-type ATPase A - - 69 138 1.1E-21
SUPERFAMILY SSF55008 HMA, heavy metal-associated domain IPR036163 Heavy metal-associated domain superfamily 3 68 2.88E-16
PRINTS PR00943 Copper-transporting ATPase signature - - 273 291 4.0E-13
NCBIfam TIGR01494 JCVI: HAD-IC family P-type ATPase IPR001757 P-type ATPase 256 504 1.6E-44
PRINTS PR00943 Copper-transporting ATPase signature - - 406 420 4.0E-13
PRINTS PR00943 Copper-transporting ATPase signature - - 661 678 4.0E-13
Pfam PF00403 Heavy-metal-associated domain IPR006121 Heavy metal-associated domain, HMA 11 66 1.9E-11
NCBIfam TIGR01494 JCVI: HAD-IC family P-type ATPase IPR001757 P-type ATPase 605 764 2.5E-40
Gene3D G3DSA:2.70.150.10 - - - 271 387 9.8E-32
PRINTS PR00119 P-type cation-transporting ATPase superfamily signature - - 631 641 6.7E-21
SFLD SFLDS00003 Haloacid Dehalogenase - - 465 735 0.0
Gene3D G3DSA:3.40.50.1000 - IPR023214 HAD superfamily 450 740 8.8E-59

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.