Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a1007
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PF01402
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PANTHER | PTHR40688 | - | - | - | 2 | 77 | 1.3E-18 |
| Pfam | PF01402 | Ribbon-helix-helix protein, copG family | IPR002145 | Ribbon-helix-helix protein, CopG | 6 | 42 | 3.3E-4 |
| SUPERFAMILY | SSF47598 | Ribbon-helix-helix | IPR010985 | Ribbon-helix-helix | 5 | 43 | 4.22E-6 |
| CDD | cd22233 | RHH_CopAso-like | - | - | 5 | 47 | 1.99563E-8 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.