Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a1164

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005509 calcium ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF103647
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01021
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature - - 184 201 1.1E-8
MobiDBLite mobidb-lite consensus disorder prediction - - 211 241 -
PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature - - 222 241 1.1E-8
Gene3D G3DSA:3.30.1330.60 - IPR036737 OmpA-like domain superfamily 120 241 1.9E-40
MobiDBLite mobidb-lite consensus disorder prediction - - 205 241 -
PRINTS PR01021 OMPA domain signature IPR006664 Outer membrane protein, bacterial 169 184 1.9E-19
PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature - - 202 221 1.1E-8
SUPERFAMILY SSF103088 OmpA-like IPR036737 OmpA-like domain superfamily 118 239 1.83E-37
SUPERFAMILY SSF103647 TSP type-3 repeat IPR028974 TSP type-3 repeat 77 111 1.01E-6
PRINTS PR01021 OMPA domain signature IPR006664 Outer membrane protein, bacterial 184 200 1.9E-19
PRINTS PR01021 OMPA domain signature IPR006664 Outer membrane protein, bacterial 139 161 1.9E-19
CDD cd07185 OmpA_C-like IPR006665 OmpA-like domain 137 239 3.97829E-50
Pfam PF00691 OmpA family IPR006665 OmpA-like domain 138 233 5.9E-25
PANTHER PTHR30329 STATOR ELEMENT OF FLAGELLAR MOTOR COMPLEX - - 128 239 6.9E-32

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.