Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_cmegl29
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | pba00520 | Amino sugar and nucleotide sugar metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PANTHER | PTHR43300 | ACETYLTRANSFERASE | - | - | 15 | 174 | 1.7E-32 |
| Gene3D | G3DSA:2.160.10.10 | Hexapeptide repeat proteins | - | - | 18 | 169 | 5.5E-45 |
| CDD | cd03358 | LbH_WxcM_N_like | - | - | 52 | 170 | 8.15548E-62 |
| SUPERFAMILY | SSF51161 | Trimeric LpxA-like enzymes | IPR011004 | Trimeric LpxA-like superfamily | 20 | 175 | 2.91E-42 |
| Gene3D | G3DSA:2.20.70.110 | - | - | - | 170 | 207 | 5.9E-17 |
| Pfam | PF14602 | Hexapeptide repeat of succinyl-transferase | IPR001451 | Hexapeptide repeat | 124 | 152 | 4.5E-4 |
| Pfam | PF00132 | Bacterial transferase hexapeptide (six repeats) | IPR001451 | Hexapeptide repeat | 31 | 66 | 7.2E-7 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.