Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a2098

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0010181 FMN binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF04205
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0045893 positive regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF036354
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF036354
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF04205
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR30224 ELECTRON TRANSPORT PROTEIN - - 73 704 0.0
PIRSF PIRSF036354 NosR IPR011399 Nitrous oxide reductase expression regulator NosR 6 729 0.0
Pfam PF12801 4Fe-4S binding domain IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain 503 549 9.7E-15
Pfam PF12801 4Fe-4S binding domain IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain 604 650 3.1E-5
SUPERFAMILY SSF54862 4Fe-4S ferredoxins - - 524 687 6.92E-8
SMART SM00900 FMN_bind_2 IPR007329 FMN-binding 89 182 9.8E-12
Pfam PF04205 FMN-binding domain IPR007329 FMN-binding 92 179 5.3E-5

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.