Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a2100

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SMART	SM00710	pbh1	IPR006626	Parallel beta-helix repeat	232	254	1300.0
NCBIfam	TIGR03804	JCVI: parallel beta-helix repeat (two copies)	IPR022441	Parallel beta-helix repeat-2	160	200	7.9E-7
SMART	SM00722	complete	IPR006633	Carbohydrate-binding/sugar hydrolysis domain	46	186	6.7E-19
SMART	SM00710	pbh1	IPR006626	Parallel beta-helix repeat	210	231	3000.0
SMART	SM00710	pbh1	IPR006626	Parallel beta-helix repeat	188	209	240.0
SMART	SM00710	pbh1	IPR006626	Parallel beta-helix repeat	114	135	14.0
Gene3D	G3DSA:2.160.20.10	-	IPR012334	Pectin lyase fold	225	359	6.1E-10
SMART	SM00722	complete	IPR006633	Carbohydrate-binding/sugar hydrolysis domain	192	366	1.2E-28
Gene3D	G3DSA:2.160.20.10	-	IPR012334	Pectin lyase fold	40	224	7.4E-14
SMART	SM00710	pbh1	IPR006626	Parallel beta-helix repeat	291	312	120.0
SUPERFAMILY	SSF51126	Pectin lyase-like	IPR011050	Pectin lyase fold/virulence factor	49	407	6.79E-51
SMART	SM00710	pbh1	IPR006626	Parallel beta-helix repeat	136	165	1700.0
SMART	SM00710	pbh1	IPR006626	Parallel beta-helix repeat	84	112	650.0
SMART	SM00710	pbh1	IPR006626	Parallel beta-helix repeat	166	187	13.0
Pfam	PF05048	Periplasmic copper-binding protein (NosD)	IPR007742	Periplasmic copper-binding protein NosD, beta helix domain	143	355	7.9E-54
SMART	SM00710	pbh1	IPR006626	Parallel beta-helix repeat	314	352	3000.0
NCBIfam	TIGR04247	JCVI: nitrous oxide reductase family maturation protein NosD	IPR026464	Nitrous oxide reductase family maturation protein NosD	31	419	0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.