Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a2108
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 90 | 109 | - |
| PANTHER | PTHR33678 | BLL1576 PROTEIN | - | - | 24 | 493 | 0.0 |
| Pfam | PF03050 | Transposase IS66 family | IPR004291 | Transposase IS66, central domain | 181 | 462 | 2.4E-105 |
| NCBIfam | NF033517 | NCBIFAM: IS66 family transposase | - | - | 101 | 492 | 0.0 |
| Pfam | PF13007 | Transposase C of IS166 homeodomain | IPR024463 | Transposase TnpC, homeodomain | 45 | 118 | 3.3E-12 |
| Coils | Coil | Coil | - | - | 36 | 56 | - |
| Pfam | PF13817 | IS66 C-terminal element | IPR039552 | Transposase IS66, C-terminal | 469 | 506 | 4.1E-16 |
| Pfam | PF13005 | zinc-finger binding domain of transposase IS66 | IPR024474 | Transposase IS66, zinc-finger binding domain of | 125 | 167 | 1.7E-12 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.