Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a3075

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF48452
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF48452 TPR-like IPR011990 Tetratricopeptide-like helical domain superfamily 156 346 6.75E-21
Pfam PF14561 Tetratricopeptide repeat - - 267 327 1.3E-6
SMART SM00028 tpr_5 IPR019734 Tetratricopeptide repeat 278 311 170.0
Pfam PF14559 Tetratricopeptide repeat - - 157 211 8.3E-6
SMART SM00028 tpr_5 IPR019734 Tetratricopeptide repeat 244 277 190.0
PANTHER PTHR44943 CELLULOSE SYNTHASE OPERON PROTEIN C - - 107 229 1.0E-13
Gene3D G3DSA:1.25.40.10 Tetratricopeptide repeat domain IPR011990 Tetratricopeptide-like helical domain superfamily 87 352 3.1E-28
SMART SM00028 tpr_5 IPR019734 Tetratricopeptide repeat 176 209 6.8E-4
Coils Coil Coil - - 182 205 -
SUPERFAMILY SSF48371 ARM repeat IPR016024 Armadillo-type fold 53 151 4.03E-6

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.