Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a3317

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pba02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF05943 EvpB/VC_A0108, tail sheath N-terminal domain IPR044031 TssC1, N-terminal 67 367 0.0
NCBIfam TIGR03355 JCVI: type VI secretion system contractile sheath large subunit IPR010269 Type VI secretion system TssC-like 18 488 0.0
PANTHER PTHR35565 CYTOPLASMIC PROTEIN-RELATED IPR010269 Type VI secretion system TssC-like 4 490 0.0
Pfam PF18945 EvpB/VC_A0108, tail sheath gpW/gp25-like domain IPR044032 TssC1, C-terminal 376 487 1.0E-45

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.