Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a3365

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF001235
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016787 hydrolase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01546
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pba01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pba00240 Pyrimidine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF01546 Peptidase family M20/M25/M40 IPR002933 Peptidase M20 116 442 2.6E-38
Gene3D G3DSA:3.30.70.360 - - - 249 363 0.0
PANTHER PTHR32494 ALLANTOATE DEIMINASE-RELATED IPR010158 Amidase, carbamoylase-type 36 445 3.0E-127
NCBIfam TIGR01879 JCVI: hydantoinase/carbamoylase family amidase IPR010158 Amidase, carbamoylase-type 46 442 0.0
CDD cd03884 M20_bAS - - 48 442 0.0
Gene3D G3DSA:3.40.630.10 Zn peptidases - - 51 438 0.0
SUPERFAMILY SSF53187 Zn-dependent exopeptidases - - 33 442 3.43E-99
PIRSF PIRSF001235 Amidase_hyd_carb IPR010158 Amidase, carbamoylase-type 41 449 0.0
SUPERFAMILY SSF55031 Bacterial exopeptidase dimerisation domain IPR036264 Bacterial exopeptidase dimerisation domain 249 364 1.64E-29

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.