Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a3445

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0050568 protein-glutamine glutaminase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd16352
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd16352
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pba02030 Bacterial chemotaxis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.1330.200 - IPR038592 CheD-like superfamily 8 163 2.8E-45
CDD cd16352 CheD IPR005659 Chemoreceptor glutamine deamidase CheD 10 157 7.41493E-58
SUPERFAMILY SSF64438 CNF1/YfiH-like putative cysteine hydrolases IPR011324 Cytotoxic necrotizing factor-like, catalytic 10 161 1.37E-38
Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. IPR005659 Chemoreceptor glutamine deamidase CheD 5 162 22.204081
Pfam PF03975 CheD chemotactic sensory transduction IPR005659 Chemoreceptor glutamine deamidase CheD 53 157 2.4E-20
PANTHER PTHR35147 CHEMORECEPTOR GLUTAMINE DEAMIDASE CHED-RELATED IPR005659 Chemoreceptor glutamine deamidase CheD 5 159 2.6E-34

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.