Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a5629

Gene Feature Overview

Strain	Pseudomonas brassicacearum subsp. brassicacearum NFM421 GCF_000194805.1|latest
Locus Tag	PSEBR_a5629
Name
Replicon	chromosome
Genomic location	6799083 - 6800051 (+ strand)

Cross-References

RefSeq	YP_004357172.1
GI	330812710
Entrez	10474943
INSDC	AEA72168.1
NCBI Locus Tag	PSEBR_a5629
UniParc	UPI0002040EEF
UniProtKB Acc	F2K791
UniProtKB ID	F2K791_PSEBN
UniRef100	UniRef100_A0A0D0T8D2
UniRef50	UniRef50_Q51366
UniRef90	UniRef90_Q3K486

Product

Feature Type	CDS
Coding Frame	1
Product Name	GDP-mannose 4,6-dehydratase
Synonyms
Evidence for Translation
Charge (pH 7)	-2.89
Kyte-Doolittle Hydrophobicity Value	-0.243
Molecular Weight (kDa)	36.3
Isoelectric Point (pI)	6.43

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 610 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004999 (381 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSEBR_a5629 Search term: GDP-mannose 4,6-dehydratase

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000370194 GDP-mannose 4,6-dehydratase [Source:HGNC Symbol;Acc:HGNC:4369] E-value: 3.5e-83 Percent Identity: 46.9

References