Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_c2g117

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0055085	transmembrane transport	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00164	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0043190	ATP-binding cassette (ABC) transporter complex	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00164	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00164	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0140359	ABC-type transmembrane transporter activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00164	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pba02010	ABC transporters	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF01061	ABC-2 type transporter	IPR013525	ABC-2 type transporter, transmembrane domain	20	225	1.1E-26
PRINTS	PR00164	ABC-2 type transport system membrane protein signature	IPR000412	ABC-2 transporter	183	202	1.4E-5
PANTHER	PTHR30413	INNER MEMBRANE TRANSPORT PERMEASE	-	-	6	265	1.7E-70
PRINTS	PR00164	ABC-2 type transport system membrane protein signature	IPR000412	ABC-2 transporter	146	170	1.4E-5
PRINTS	PR00164	ABC-2 type transport system membrane protein signature	IPR000412	ABC-2 transporter	35	56	1.4E-5

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.