Pseudomonas sp. UW4, PputUW4_01170

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
MetaCyc agarose degradation InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc porphyran degradation InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc xyloglucan degradation II (exoglucanase) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:2.60.120.430 - - - 27 203 4.7E-32
Pfam PF17992 Agarase CBM like domain IPR040669 Agarase, CBM-like domain 73 183 8.4E-7
MobiDBLite mobidb-lite consensus disorder prediction - - 795 814 -
MobiDBLite mobidb-lite consensus disorder prediction - - 795 830 -
SUPERFAMILY SSF51445 (Trans)glycosidases IPR017853 Glycoside hydrolase superfamily 436 773 4.06E-34
Gene3D G3DSA:3.20.20.80 Glycosidases - - 209 785 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.