Pseudomonas sp. UW4, PputUW4_01637 (gudD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0019394 glucarate catabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03247
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008872 glucarate dehydratase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03247
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000287 magnesium ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03247
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppuu00053 Ascorbate and aldarate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppuu01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc D-glucarate degradation II InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.390.10 - IPR029017 Enolase-like, N-terminal 10 415 0.0
SUPERFAMILY SSF51604 Enolase C-terminal domain-like IPR036849 Enolase-like, C-terminal domain superfamily 141 417 3.07E-85
SMART SM00922 MR_MLE_2 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal 187 287 1.5E-16
CDD cd03323 D-glucarate_dehydratase IPR034598 D-Glucarate dehydratase-like 11 418 0.0
PANTHER PTHR48080 D-GALACTONATE DEHYDRATASE-RELATED IPR034593 D-galactonate dehydratase DgoD-like 32 413 7.7E-73
Gene3D G3DSA:3.20.20.120 - IPR036849 Enolase-like, C-terminal domain superfamily 140 399 0.0
FunFam G3DSA:3.20.20.120:FF:000003 Glucarate dehydratase - - 140 399 0.0
Pfam PF13378 Enolase C-terminal domain-like IPR029065 Enolase C-terminal domain-like 191 406 2.7E-39
SUPERFAMILY SSF54826 Enolase N-terminal domain-like IPR029017 Enolase-like, N-terminal 10 139 8.66E-33
SFLD SFLDF00005 glucarate dehydratase IPR034598 D-Glucarate dehydratase-like 4 447 0.0
NCBIfam TIGR03247 JCVI: glucarate dehydratase IPR017653 Glucarate dehydratase 8 447 0.0
SFLD SFLDS00001 Enolase - - 4 447 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.