Pseudomonas sp. UW4, PputUW4_02182

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006979 response to oxidative stress
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF48113
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005509 calcium ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08548
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005615 extracellular space
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08548
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0020037 heme binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF48113
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004601 peroxidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF48113
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00313 NodO calcium binding signature - - 1166 1175 4.9E-8
Gene3D G3DSA:2.150.10.10 - IPR011049 Serralysin-like metalloprotease, C-terminal 1580 1672 2.8E-10
SUPERFAMILY SSF51120 beta-Roll IPR011049 Serralysin-like metalloprotease, C-terminal 1751 1977 6.07E-23
Gene3D G3DSA:2.150.10.10 - IPR011049 Serralysin-like metalloprotease, C-terminal 1761 1979 2.0E-31
Pfam PF00353 RTX calcium-binding nonapeptide repeat (4 copies) IPR001343 RTX calcium-binding nonapeptide repeat 1617 1652 1.1E-7
Gene3D G3DSA:1.10.640.10 Haem peroxidase domain superfamily, animal type IPR037120 Haem peroxidase domain superfamily, animal type 75 329 2.2E-19
Gene3D G3DSA:2.150.10.10 - IPR011049 Serralysin-like metalloprotease, C-terminal 1123 1221 1.4E-5
Gene3D G3DSA:1.10.640.10 Haem peroxidase domain superfamily, animal type IPR037120 Haem peroxidase domain superfamily, animal type 469 945 3.3E-86
Pfam PF00353 RTX calcium-binding nonapeptide repeat (4 copies) IPR001343 RTX calcium-binding nonapeptide repeat 1834 1867 2.0E-5
Pfam PF00353 RTX calcium-binding nonapeptide repeat (4 copies) IPR001343 RTX calcium-binding nonapeptide repeat 1093 1127 2.0E-7
Pfam PF00353 RTX calcium-binding nonapeptide repeat (4 copies) IPR001343 RTX calcium-binding nonapeptide repeat 1523 1553 1.7E-5
Pfam PF00353 RTX calcium-binding nonapeptide repeat (4 copies) IPR001343 RTX calcium-binding nonapeptide repeat 1129 1162 6.0E-7
Pfam PF00353 RTX calcium-binding nonapeptide repeat (4 copies) IPR001343 RTX calcium-binding nonapeptide repeat 1054 1083 6.5E-4
Pfam PF03098 Animal haem peroxidase IPR019791 Haem peroxidase, animal-type 80 319 2.0E-11
SUPERFAMILY SSF51120 beta-Roll IPR011049 Serralysin-like metalloprotease, C-terminal 1522 1613 6.15E-14
PRINTS PR00313 NodO calcium binding signature - - 1073 1081 4.9E-8
SUPERFAMILY SSF51120 beta-Roll IPR011049 Serralysin-like metalloprotease, C-terminal 1656 1761 7.67E-14
Pfam PF00353 RTX calcium-binding nonapeptide repeat (4 copies) IPR001343 RTX calcium-binding nonapeptide repeat 1265 1293 0.051
PRINTS PR00313 NodO calcium binding signature - - 1094 1102 4.9E-8
SUPERFAMILY SSF48113 Heme-dependent peroxidases IPR010255 Haem peroxidase superfamily 77 928 7.46E-89
Gene3D G3DSA:2.60.40.2700 - - - 1431 1509 1.7E-10
SUPERFAMILY SSF51120 beta-Roll IPR011049 Serralysin-like metalloprotease, C-terminal 1007 1086 4.58E-15
Gene3D G3DSA:2.150.10.10 - IPR011049 Serralysin-like metalloprotease, C-terminal 1052 1122 1.5E-8
PRINTS PR00313 NodO calcium binding signature - - 1052 1063 4.9E-8
Pfam PF00353 RTX calcium-binding nonapeptide repeat (4 copies) IPR001343 RTX calcium-binding nonapeptide repeat 1010 1044 8.3E-7
SUPERFAMILY SSF51120 beta-Roll IPR011049 Serralysin-like metalloprotease, C-terminal 1091 1214 1.57E-14
MobiDBLite mobidb-lite consensus disorder prediction - - 1825 1858 -
PANTHER PTHR11475 OXIDASE/PEROXIDASE - - 571 735 2.6E-53
Pfam PF00353 RTX calcium-binding nonapeptide repeat (4 copies) IPR001343 RTX calcium-binding nonapeptide repeat 1707 1741 3.4E-6
Pfam PF03098 Animal haem peroxidase IPR019791 Haem peroxidase, animal-type 496 924 2.4E-48
Pfam PF08548 Peptidase M10 serralysin C terminal IPR013858 Peptidase M10 serralysin, C-terminal 1771 1978 7.9E-8

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.