Pseudomonas sp. UW4, PputUW4_03086

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01021
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR01021 OMPA domain signature IPR006664 Outer membrane protein, bacterial 477 492 7.6E-8
PRINTS PR01021 OMPA domain signature IPR006664 Outer membrane protein, bacterial 492 508 7.6E-8
Gene3D G3DSA:3.30.1330.60 - IPR036737 OmpA-like domain superfamily 422 551 1.3E-32
SUPERFAMILY SSF103088 OmpA-like IPR036737 OmpA-like domain superfamily 434 548 2.22E-31
PANTHER PTHR30329 STATOR ELEMENT OF FLAGELLAR MOTOR COMPLEX - - 219 551 1.1E-39
Pfam PF00691 OmpA family IPR006665 OmpA-like domain 446 542 3.1E-17
CDD cd07185 OmpA_C-like IPR006665 OmpA-like domain 453 548 2.28027E-34
PRINTS PR01021 OMPA domain signature IPR006664 Outer membrane protein, bacterial 447 469 7.6E-8

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.