Pseudomonas sp. UW4, PputUW4_03233

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Upstream Motifs

*Up to 500bp upstream
Name Start Stop Strand Evidence PMID
Inverted repeat: GGCCACCACAAC-N5-GTTGTGGTGGCC 3782168 3782196 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Inverted repeat: CTGTAGGAGC-N80-GCTCCTACAG 3782210 3782309 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Rho-independent transcription terminator TERM 790 3782168 3782196 + ECO:0000246
computational combinatorial evidence used in automatic assertion
17313685 Details

Motifs annotated in this feature

Name Start Stop Strand Evidence PMID
Inverted repeat: GGCCGTGCCG-N61-CGGCACGGCC 3782938 3783018 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details

Downstream motifs

*Up to 500bp downstream
Name Start Stop Strand Evidence PMID
Inverted repeat: AGCAAGCTCGCTCCTACAG-N10-CTGTAGGAGCGAGCTTGCT 3784243 3784290 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Inverted repeat: TCGTTAACGA-N58-TCGTTAACGA 3784299 3784376 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Rho-independent transcription terminator TERM 791 3784248 3784285 - ECO:0000246
computational combinatorial evidence used in automatic assertion
17313685 Details
Rho-independent transcription terminator TERM 792 3784248 3784285 + ECO:0000246
computational combinatorial evidence used in automatic assertion
17313685 Details