Pseudomonas sp. UW4, PputUW4_03247 (ndh1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003954 NADH dehydrogenase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR43706
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006116 NADH oxidation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR43706
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016491 oxidoreductase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07992
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppuu00190 Oxidative phosphorylation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR43706 NADH DEHYDROGENASE IPR045024 Alternative NADH dehydrogenase 2 352 2.2E-55
PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature - - 155 180 2.0E-6
Gene3D G3DSA:3.50.50.100 - - - 1 388 1.2E-84
SUPERFAMILY SSF51905 FAD/NAD(P)-binding domain IPR036188 FAD/NAD(P)-binding domain superfamily 3 339 3.17E-29
PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature - - 102 120 5.7E-13
PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature - - 155 173 5.7E-13
PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature - - 5 24 5.7E-13
Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase IPR023753 FAD/NAD(P)-binding domain 4 313 1.5E-46
PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature - - 286 293 2.0E-6
PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature - - 4 26 2.0E-6

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.