Pseudomonas sp. UW4, PputUW4_03255 (benC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0051536 iron-sulfur cluster binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00111
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016491 oxidoreductase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00175
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppuu01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppuu01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppuu00364 Fluorobenzoate degradation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppuu01220 Degradation of aromatic compounds 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppuu00622 Xylene degradation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppuu00362 Benzoate degradation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:2.40.30.10 Translation factors - - 101 199 5.2E-23
Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain 10 85 1.5E-15
SUPERFAMILY SSF54292 2Fe-2S ferredoxin-like IPR036010 2Fe-2S ferredoxin-like superfamily 1 100 3.28E-27
PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase 153 160 1.8E-6
PRINTS PR00410 Phenol hydroxylase reductase family signature - - 196 205 1.1E-24
PRINTS PR00410 Phenol hydroxylase reductase family signature - - 300 308 1.1E-24
Pfam PF00970 Oxidoreductase FAD-binding domain IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain 109 202 1.2E-16
PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase 211 230 1.8E-6
PRINTS PR00410 Phenol hydroxylase reductase family signature - - 136 148 1.1E-24
SUPERFAMILY SSF63380 Riboflavin synthase domain-like IPR017938 Riboflavin synthase-like beta-barrel 76 204 4.94E-24
PRINTS PR00410 Phenol hydroxylase reductase family signature - - 236 245 1.1E-24
PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase 300 308 1.8E-6
Gene3D G3DSA:3.10.20.30 - IPR012675 Beta-grasp domain superfamily 1 100 1.6E-28
PANTHER PTHR47354 NADH OXIDOREDUCTASE HCR - - 17 91 1.6E-68
PRINTS PR00410 Phenol hydroxylase reductase family signature - - 153 160 1.1E-24
NCBIfam NF040810 NCBIFAM: benzoate 1,2-dioxygenase electron transfer component BenC - - 3 335 0.0
Pfam PF00175 Oxidoreductase NAD-binding domain IPR001433 Oxidoreductase FAD/NAD(P)-binding 212 314 1.4E-20
SUPERFAMILY SSF52343 Ferredoxin reductase-like, C-terminal NADP-linked domain IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain 202 333 4.71E-34
CDD cd00207 fer2 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain 17 92 5.1734E-23
PRINTS PR00410 Phenol hydroxylase reductase family signature - - 211 230 1.1E-24
Gene3D G3DSA:3.40.50.80 - IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain 200 332 1.9E-34
CDD cd06209 BenDO_FAD_NAD IPR047683 Benzoate 1,2-dioxygenase reductase, FAD/NAD binding domain 107 333 2.17585E-130

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.