Pseudomonas protegens Pf-5, PFL_0684

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0684
Name
Replicon chromosome
Genomic location 796159 - 796767 (+ strand)

Cross-References

RefSeq YP_257826.1
GI 70734186
Entrez 3481273
INSDC AAY96091.1
NCBI Locus Tag PFL_0684
UniParc UPI000054CDFE
UniProtKB Acc Q4KIV7
UniProtKB ID Q4KIV7_PSEF5
UniRef100 UniRef100_Q4KIV7
UniRef50 UniRef50_W9TGF0
UniRef90 UniRef90_Q4KIV7

Product

Feature Type CDS
Coding Frame 1
Product Name
lipoprotein
Synonyms
Evidence for Translation
Charge (pH 7) 1.88
Kyte-Doolittle Hydrophobicity Value -0.466
Molecular Weight (kDa) 21912.2
Isoelectric Point (pI) 8.17

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 6 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004429 (505 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0684
Search term: lipoprotein

Human Homologs

References

No references are associated with this feature.