Pseudomonas protegens Pf-5, PFL_0698 (cpaB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 34 | 56 | - |
| CDD | cd11614 | SAF_CpaB_FlgA_like | - | - | 59 | 117 | 1.86344E-7 |
| SMART | SM00858 | SAF_3 | IPR013974 | SAF domain | 58 | 118 | 1.9E-6 |
| NCBIfam | TIGR03177 | JCVI: Flp pilus assembly protein CpaB | IPR017592 | Pilus assembly, Flp-type CpaB | 12 | 309 | 2.7E-69 |
| Pfam | PF16976 | Flp pilus assembly protein RcpC/CpaB | IPR031571 | Flp pilus assembly protein RcpC/CpaB domain | 122 | 244 | 8.5E-26 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.