Pseudomonas protegens Pf-5, PFL_0700

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0700
Name
Replicon chromosome
Genomic location 812387 - 812797 (+ strand)

Cross-References

RefSeq YP_257842.1
GI 70734202
Entrez 3481289
INSDC AAY96107.1
NCBI Locus Tag PFL_0700
UniParc UPI000054CE0E
UniProtKB Acc Q4KIU1
UniProtKB ID Q4KIU1_PSEF5
UniRef100 UniRef100_Q4KIU1
UniRef50 UniRef50_Q4KIU1
UniRef90 UniRef90_Q4KIU1

Product

Feature Type CDS
Coding Frame 1
Product Name
response regulator recevier domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) -7.38
Kyte-Doolittle Hydrophobicity Value -0.005
Molecular Weight (kDa) 15424.7
Isoelectric Point (pI) 4.97

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 513 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG018834 (120 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0700

Human Homologs

References

No references are associated with this feature.