Pseudomonas protegens Pf-5, PFL_0713

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07690
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00710
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07690
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:1990961 xenobiotic detoxification by transmembrane export across the plasma membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00710
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0042910 xenobiotic transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00710
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR23502 MAJOR FACILITATOR SUPERFAMILY - - 5 387 4.8E-42
CDD cd17320 MFS_MdfA_MDR_like - - 6 384 1.55687E-105
FunFam G3DSA:1.20.1720.10:FF:000005 Bcr/CflA family efflux transporter - - 5 383 1.5E-126
SUPERFAMILY SSF103473 MFS general substrate transporter IPR036259 MFS transporter superfamily 3 387 1.44E-54
Pfam PF07690 Major Facilitator Superfamily IPR011701 Major facilitator superfamily 15 346 5.5E-36
NCBIfam TIGR00710 JCVI: Bcr/CflA family efflux MFS transporter IPR004812 Drug resistance transporter Bcr/CmlA subfamily 3 380 3.0E-88
Gene3D G3DSA:1.20.1720.10 Multidrug resistance protein D - - 5 383 2.5E-105

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.